Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Gm12266-201ENSMUST00000120311 962 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Gm22138-201ENSMUST00000158748 128 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.34□□□□□ -0.43
VcanQ62059 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.34□□□□□ -0.43
VcanQ62059 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
VcanQ62059 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Gm8492-201ENSMUST00000182375 987 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Gm28324-201ENSMUST00000187913 264 ntBASIC12.34□□□□□ -0.43
VcanQ62059 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
VcanQ62059 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VcanQ62059 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
VcanQ62059 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VcanQ62059 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.33□□□□□ -0.43
VcanQ62059 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.33□□□□□ -0.43
VcanQ62059 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.33□□□□□ -0.43
VcanQ62059 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.33□□□□□ -0.43
VcanQ62059 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VcanQ62059 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
VcanQ62059 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
VcanQ62059 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.33□□□□□ -0.44
VcanQ62059 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.33□□□□□ -0.44
VcanQ62059 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Gm34023-201ENSMUST00000195539 217 ntBASIC12.33□□□□□ -0.44
VcanQ62059 Gm45527-201ENSMUST00000211052 774 ntBASIC12.33□□□□□ -0.44
VcanQ62059 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VcanQ62059 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VcanQ62059 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.33□□□□□ -0.44
VcanQ62059 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.33□□□□□ -0.44
VcanQ62059 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Gm13875-201ENSMUST00000120162 282 ntBASIC12.33□□□□□ -0.44
VcanQ62059 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.33□□□□□ -0.44
VcanQ62059 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VcanQ62059 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcanQ62059 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VcanQ62059 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Gm13888-201ENSMUST00000119148 422 ntBASIC12.32□□□□□ -0.44
VcanQ62059 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Gm25043-201ENSMUST00000158604 212 ntBASIC12.32□□□□□ -0.44
VcanQ62059 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VcanQ62059 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VcanQ62059 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms