Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Six4Q61321 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six4Q61321 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six4Q61321 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six4Q61321 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Six4Q61321 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six4Q61321 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six4Q61321 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Six4Q61321 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six4Q61321 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.6□□□□□ -0.23
Six4Q61321 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.6□□□□□ -0.23
Six4Q61321 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Six4Q61321 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Six4Q61321 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.6□□□□□ -0.23
Six4Q61321 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.59□□□□□ -0.23
Six4Q61321 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Six4Q61321 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Six4Q61321 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.59□□□□□ -0.23
Six4Q61321 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.59□□□□□ -0.23
Six4Q61321 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Six4Q61321 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Six4Q61321 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Gm11918-201ENSMUST00000121660 179 ntBASIC13.59□□□□□ -0.23
Six4Q61321 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.59□□□□□ -0.23
Six4Q61321 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.59□□□□□ -0.23
Six4Q61321 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.59□□□□□ -0.23
Six4Q61321 Gm44397-201ENSMUST00000195950 113 ntBASIC13.59□□□□□ -0.23
Six4Q61321 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.59□□□□□ -0.23
Six4Q61321 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.59□□□□□ -0.23
Six4Q61321 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.59□□□□□ -0.23
Six4Q61321 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.59□□□□□ -0.23
Six4Q61321 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.59□□□□□ -0.23
Six4Q61321 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.59□□□□□ -0.23
Six4Q61321 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Six4Q61321 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six4Q61321 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Six4Q61321 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Six4Q61321 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Six4Q61321 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Six4Q61321 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Six4Q61321 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Gm15371-201ENSMUST00000117057 784 ntBASIC13.58□□□□□ -0.24
Six4Q61321 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.58□□□□□ -0.24
Six4Q61321 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.58□□□□□ -0.24
Six4Q61321 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Six4Q61321 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.58□□□□□ -0.24
Six4Q61321 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.58□□□□□ -0.24
Six4Q61321 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Six4Q61321 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Six4Q61321 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Six4Q61321 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.58□□□□□ -0.24
Six4Q61321 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six4Q61321 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Six4Q61321 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.57□□□□□ -0.24
Six4Q61321 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms