Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.99□□□□□ -0.33
Col12a1Q60847 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.99□□□□□ -0.33
Col12a1Q60847 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm8325-201ENSMUST00000099086 453 ntBASIC12.99□□□□□ -0.33
Col12a1Q60847 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm17889-201ENSMUST00000198410 598 ntBASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm19287-201ENSMUST00000203190 358 ntBASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm17812-201ENSMUST00000204935 318 ntBASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm19640-201ENSMUST00000214849 464 ntBASIC12.99□□□□□ -0.33
Col12a1Q60847 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.99□□□□□ -0.33
Col12a1Q60847 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.99□□□□□ -0.33
Col12a1Q60847 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.99□□□□□ -0.33
Col12a1Q60847 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Gm10312-201ENSMUST00000078515 489 ntBASIC12.99□□□□□ -0.33
Col12a1Q60847 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col12a1Q60847 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.98□□□□□ -0.33
Col12a1Q60847 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.98□□□□□ -0.33
Col12a1Q60847 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col12a1Q60847 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.98□□□□□ -0.33
Col12a1Q60847 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col12a1Q60847 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.98□□□□□ -0.33
Col12a1Q60847 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.98□□□□□ -0.33
Col12a1Q60847 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.98□□□□□ -0.33
Col12a1Q60847 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.98□□□□□ -0.33
Col12a1Q60847 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Col12a1Q60847 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col12a1Q60847 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.98□□□□□ -0.33
Col12a1Q60847 Mir1901-201ENSMUST00000122616 78 ntBASIC12.98□□□□□ -0.33
Col12a1Q60847 Gm25545-201ENSMUST00000122673 323 ntBASIC12.98□□□□□ -0.33
Col12a1Q60847 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.98□□□□□ -0.33
Col12a1Q60847 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col12a1Q60847 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.97□□□□□ -0.33
Col12a1Q60847 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.97□□□□□ -0.33
Col12a1Q60847 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Col12a1Q60847 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col12a1Q60847 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.97□□□□□ -0.33
Col12a1Q60847 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col12a1Q60847 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.97□□□□□ -0.33
Col12a1Q60847 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.97□□□□□ -0.33
Col12a1Q60847 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.97□□□□□ -0.33
Col12a1Q60847 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms