Protein–RNA interactions for Protein: Q60722

Tcf4, Transcription factor 4, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf4Q60722 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Tcf4Q60722 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tcf4Q60722 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Tcf4Q60722 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm12403-201ENSMUST00000121384 959 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.04□□□□□ -0.16
Tcf4Q60722 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm10576-201ENSMUST00000191927 825 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm5279-201ENSMUST00000199575 745 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm6218-201ENSMUST00000219812 628 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tcf4Q60722 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.04□□□□□ -0.16
Tcf4Q60722 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tcf4Q60722 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tcf4Q60722 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.03□□□□□ -0.16
Tcf4Q60722 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tcf4Q60722 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.03□□□□□ -0.16
Tcf4Q60722 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Tcf4Q60722 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Tcf4Q60722 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tcf4Q60722 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.03□□□□□ -0.16
Tcf4Q60722 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Gm27772-201ENSMUST00000184900 187 ntBASIC14.03□□□□□ -0.16
Tcf4Q60722 Gm28760-201ENSMUST00000185995 736 ntBASIC14.03□□□□□ -0.16
Tcf4Q60722 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tcf4Q60722 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.03□□□□□ -0.16
Tcf4Q60722 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.03□□□□□ -0.16
Tcf4Q60722 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tcf4Q60722 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tcf4Q60722 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.03□□□□□ -0.16
Tcf4Q60722 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tcf4Q60722 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
Tcf4Q60722 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tcf4Q60722 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tcf4Q60722 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tcf4Q60722 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.02□□□□□ -0.16
Tcf4Q60722 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tcf4Q60722 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tcf4Q60722 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tcf4Q60722 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tcf4Q60722 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tcf4Q60722 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tcf4Q60722 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Tcf4Q60722 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.02□□□□□ -0.16
Tcf4Q60722 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.02□□□□□ -0.16
Tcf4Q60722 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tcf4Q60722 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Tcf4Q60722 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms