Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shroom1Q5SX79 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shroom1Q5SX79 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shroom1Q5SX79 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Gm5687-201ENSMUST00000118252 640 ntBASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Gm6152-201ENSMUST00000151704 340 ntBASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.33□□□□□ -0.12
Shroom1Q5SX79 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shroom1Q5SX79 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Gm8213-201ENSMUST00000118191 441 ntBASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Gm17330-201ENSMUST00000221047 165 ntBASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shroom1Q5SX79 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm11803-201ENSMUST00000119966 444 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm8062-201ENSMUST00000139696 444 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm2445-201ENSMUST00000182798 989 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm8598-201ENSMUST00000221184 836 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm10478-201ENSMUST00000084451 396 ntBASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shroom1Q5SX79 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms