Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim80Q3V061 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Trim80Q3V061 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim80Q3V061 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim80Q3V061 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.97□□□□□ -0.17
Trim80Q3V061 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim80Q3V061 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim80Q3V061 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim80Q3V061 Gm6415-201ENSMUST00000118488 348 ntBASIC13.97□□□□□ -0.17
Trim80Q3V061 Gm16026-204ENSMUST00000162652 683 ntBASIC13.97□□□□□ -0.17
Trim80Q3V061 Gm25144-201ENSMUST00000179561 110 ntBASIC13.97□□□□□ -0.17
Trim80Q3V061 Gm25352-201ENSMUST00000179815 110 ntBASIC13.97□□□□□ -0.17
Trim80Q3V061 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim80Q3V061 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim80Q3V061 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.97□□□□□ -0.17
Trim80Q3V061 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim80Q3V061 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Trim80Q3V061 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim80Q3V061 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim80Q3V061 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim80Q3V061 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.96□□□□□ -0.17
Trim80Q3V061 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trim80Q3V061 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim80Q3V061 Gm13223-201ENSMUST00000118609 747 ntBASIC13.96□□□□□ -0.17
Trim80Q3V061 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim80Q3V061 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim80Q3V061 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim80Q3V061 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim80Q3V061 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim80Q3V061 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim80Q3V061 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim80Q3V061 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim80Q3V061 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trim80Q3V061 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim80Q3V061 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim80Q3V061 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.96□□□□□ -0.18
Trim80Q3V061 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim80Q3V061 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim80Q3V061 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim80Q3V061 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.95□□□□□ -0.18
Trim80Q3V061 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Gm27618-201ENSMUST00000183671 60 ntBASIC13.95□□□□□ -0.18
Trim80Q3V061 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms