Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim40Q3UWA4 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.63□□□□□ -0.39
Trim40Q3UWA4 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.63□□□□□ -0.39
Trim40Q3UWA4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim40Q3UWA4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim40Q3UWA4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim40Q3UWA4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Gm11025-201ENSMUST00000140773 466 ntBASIC12.62□□□□□ -0.39
Trim40Q3UWA4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 AA543401-201ENSMUST00000164248 1269 ntBASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Gm18027-201ENSMUST00000218947 619 ntBASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.62□□□□□ -0.39
Trim40Q3UWA4 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.62□□□□□ -0.39
Trim40Q3UWA4 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 BC001981-202ENSMUST00000191393 1545 ntBASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.62□□□□□ -0.39
Trim40Q3UWA4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.61□□□□□ -0.39
Trim40Q3UWA4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.61□□□□□ -0.39
Trim40Q3UWA4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim40Q3UWA4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms