Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Gm7774-201ENSMUST00000200064 533 ntBASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Dupd1-202ENSMUST00000224735 548 ntBASIC14.32□□□□□ -0.12
Trim43aQ3TL54 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.32□□□□□ -0.12
Trim43aQ3TL54 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.32□□□□□ -0.12
Trim43aQ3TL54 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43aQ3TL54 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.32□□□□□ -0.12
Trim43aQ3TL54 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Gm9824-201ENSMUST00000178707 561 ntBASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Gm18766-201ENSMUST00000189811 808 ntBASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Gm10576-201ENSMUST00000191927 825 ntBASIC14.31□□□□□ -0.12
Trim43aQ3TL54 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim43aQ3TL54 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Gm12428-201ENSMUST00000119844 727 ntBASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms