Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Gm14277-201ENSMUST00000121195 360 ntBASIC20.92■□□□□ 0.94
Shroom4Q1W617 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Gm8856-201ENSMUST00000185254 1144 ntBASIC20.92■□□□□ 0.94
Shroom4Q1W617 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Abhd11os-203ENSMUST00000222613 363 ntBASIC20.92■□□□□ 0.94
Shroom4Q1W617 AC161537.1-201ENSMUST00000226199 1015 ntBASIC20.92■□□□□ 0.94
Shroom4Q1W617 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom4Q1W617 AC159649.2-201ENSMUST00000222984 3223 ntBASIC20.92■□□□□ 0.94
Shroom4Q1W617 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom4Q1W617 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Ighv5-7-201ENSMUST00000192302 244 ntBASIC20.91■□□□□ 0.94
Shroom4Q1W617 Gm37986-201ENSMUST00000193285 383 ntBASIC20.91■□□□□ 0.94
Shroom4Q1W617 Gm44262-201ENSMUST00000204969 372 ntBASIC20.91■□□□□ 0.94
Shroom4Q1W617 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom4Q1W617 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Gm10729-202ENSMUST00000193403 1375 ntBASIC20.9■□□□□ 0.94
Shroom4Q1W617 Gm9333-201ENSMUST00000205452 1323 ntBASIC20.9■□□□□ 0.94
Shroom4Q1W617 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.9■□□□□ 0.94
Shroom4Q1W617 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Gm8018-201ENSMUST00000173536 789 ntBASIC20.9■□□□□ 0.94
Shroom4Q1W617 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Shroom4Q1W617 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom4Q1W617 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Shroom4Q1W617 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
Shroom4Q1W617 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC20.89■□□□□ 0.94
Shroom4Q1W617 Gm24845-201ENSMUST00000158034 109 ntBASIC20.89■□□□□ 0.94
Shroom4Q1W617 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC20.89■□□□□ 0.94
Shroom4Q1W617 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shroom4Q1W617 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC20.89■□□□□ 0.94
Shroom4Q1W617 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.94
Shroom4Q1W617 Gm43947-201ENSMUST00000203019 959 ntBASIC20.89■□□□□ 0.94
Shroom4Q1W617 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC20.89■□□□□ 0.94
Shroom4Q1W617 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shroom4Q1W617 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Shroom4Q1W617 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC20.89■□□□□ 0.93
Shroom4Q1W617 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom4Q1W617 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom4Q1W617 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom4Q1W617 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom4Q1W617 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom4Q1W617 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom4Q1W617 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom4Q1W617 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom4Q1W617 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom4Q1W617 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom4Q1W617 Gm29340-201ENSMUST00000188763 3854 ntBASIC20.88■□□□□ 0.93
Shroom4Q1W617 Gm12058-201ENSMUST00000118614 437 ntBASIC20.88■□□□□ 0.93
Shroom4Q1W617 Gm12566-201ENSMUST00000121479 359 ntBASIC20.88■□□□□ 0.93
Shroom4Q1W617 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC20.88■□□□□ 0.93
Shroom4Q1W617 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC20.88■□□□□ 0.93
Shroom4Q1W617 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC20.88■□□□□ 0.93
Shroom4Q1W617 Gm37201-201ENSMUST00000191845 523 ntBASIC20.88■□□□□ 0.93
Shroom4Q1W617 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom4Q1W617 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom4Q1W617 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom4Q1W617 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom4Q1W617 Gm4782-201ENSMUST00000168705 2046 ntBASIC20.88■□□□□ 0.93
Shroom4Q1W617 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom4Q1W617 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom4Q1W617 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms