Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm44069-201ENSMUST00000204898 506 ntBASIC11.95□□□□□ -0.5
Chd8Q09XV5 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.94□□□□□ -0.5
Chd8Q09XV5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.94□□□□□ -0.5
Chd8Q09XV5 Gm23255-201ENSMUST00000102244 110 ntBASIC11.94□□□□□ -0.5
Chd8Q09XV5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Gm22442-201ENSMUST00000157256 144 ntBASIC11.94□□□□□ -0.5
Chd8Q09XV5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Gm28693-202ENSMUST00000190758 331 ntBASIC11.94□□□□□ -0.5
Chd8Q09XV5 Gm9645-201ENSMUST00000197131 792 ntBASIC11.94□□□□□ -0.5
Chd8Q09XV5 Gm44329-201ENSMUST00000197469 112 ntBASIC11.94□□□□□ -0.5
Chd8Q09XV5 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.94□□□□□ -0.5
Chd8Q09XV5 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.94□□□□□ -0.5
Chd8Q09XV5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chd8Q09XV5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd8Q09XV5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.93□□□□□ -0.5
Chd8Q09XV5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Gm14234-201ENSMUST00000119539 845 ntBASIC11.93□□□□□ -0.5
Chd8Q09XV5 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.93□□□□□ -0.5
Chd8Q09XV5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.93□□□□□ -0.5
Chd8Q09XV5 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Gm7211-201ENSMUST00000172692 1118 ntBASIC11.93□□□□□ -0.5
Chd8Q09XV5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.93□□□□□ -0.5
Chd8Q09XV5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Chd8Q09XV5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd8Q09XV5 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms