Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.57□□□□□ -0.08
Col9a2Q07643 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Gm17420-201ENSMUST00000164753 153 ntBASIC14.57□□□□□ -0.08
Col9a2Q07643 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.57□□□□□ -0.08
Col9a2Q07643 Mir8109-201ENSMUST00000184375 117 ntBASIC14.57□□□□□ -0.08
Col9a2Q07643 Gm37922-201ENSMUST00000195596 455 ntBASIC14.57□□□□□ -0.08
Col9a2Q07643 Gm44069-201ENSMUST00000204898 506 ntBASIC14.57□□□□□ -0.08
Col9a2Q07643 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.57□□□□□ -0.08
Col9a2Q07643 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.57□□□□□ -0.08
Col9a2Q07643 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.57□□□□□ -0.08
Col9a2Q07643 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.57□□□□□ -0.08
Col9a2Q07643 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.56□□□□□ -0.08
Col9a2Q07643 Gm25261-201ENSMUST00000157416 134 ntBASIC14.56□□□□□ -0.08
Col9a2Q07643 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Gm45880-201ENSMUST00000213041 853 ntBASIC14.56□□□□□ -0.08
Col9a2Q07643 Gm45930-201ENSMUST00000221330 292 ntBASIC14.56□□□□□ -0.08
Col9a2Q07643 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.56□□□□□ -0.08
Col9a2Q07643 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.56□□□□□ -0.08
Col9a2Q07643 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.56□□□□□ -0.08
Col9a2Q07643 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a2Q07643 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col9a2Q07643 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.55□□□□□ -0.08
Col9a2Q07643 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col9a2Q07643 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col9a2Q07643 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.55□□□□□ -0.08
Col9a2Q07643 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.55□□□□□ -0.08
Col9a2Q07643 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Col9a2Q07643 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Col9a2Q07643 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Gm5370-201ENSMUST00000187187 574 ntBASIC14.55□□□□□ -0.08
Col9a2Q07643 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.55□□□□□ -0.08
Col9a2Q07643 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.55□□□□□ -0.08
Col9a2Q07643 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.55□□□□□ -0.08
Col9a2Q07643 Gm19309-201ENSMUST00000218295 205 ntBASIC14.55□□□□□ -0.08
Col9a2Q07643 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.55□□□□□ -0.08
Col9a2Q07643 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
Col9a2Q07643 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.55□□□□□ -0.08
Col9a2Q07643 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a2Q07643 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms