Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Atf4Q06507 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Atf4Q06507 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atf4Q06507 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atf4Q06507 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Atf4Q06507 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.02□□□□□ -0.33
Atf4Q06507 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Atf4Q06507 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Atf4Q06507 Gm12390-201ENSMUST00000117897 397 ntBASIC13.02□□□□□ -0.33
Atf4Q06507 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.02□□□□□ -0.33
Atf4Q06507 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.02□□□□□ -0.33
Atf4Q06507 Gm8581-201ENSMUST00000188636 890 ntBASIC13.02□□□□□ -0.33
Atf4Q06507 Gm17983-201ENSMUST00000190766 594 ntBASIC13.02□□□□□ -0.33
Atf4Q06507 Gm37631-201ENSMUST00000192275 364 ntBASIC13.02□□□□□ -0.33
Atf4Q06507 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.02□□□□□ -0.33
Atf4Q06507 Gm38384-201ENSMUST00000195413 1122 ntBASIC13.02□□□□□ -0.33
Atf4Q06507 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.02□□□□□ -0.33
Atf4Q06507 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.02□□□□□ -0.33
Atf4Q06507 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.02□□□□□ -0.33
Atf4Q06507 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Atf4Q06507 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 BC001981-202ENSMUST00000191393 1545 ntBASIC13.02□□□□□ -0.33
Atf4Q06507 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf4Q06507 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Atf4Q06507 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Atf4Q06507 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.01□□□□□ -0.33
Atf4Q06507 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atf4Q06507 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Atf4Q06507 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Atf4Q06507 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.01□□□□□ -0.33
Atf4Q06507 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Atf4Q06507 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Olfr286-202ENSMUST00000205305 969 ntBASIC13.01□□□□□ -0.33
Atf4Q06507 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.01□□□□□ -0.33
Atf4Q06507 Gm17794-201ENSMUST00000220252 955 ntBASIC13.01□□□□□ -0.33
Atf4Q06507 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Atf4Q06507 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Gm5356-201ENSMUST00000093326 615 ntBASIC13.01□□□□□ -0.33
Atf4Q06507 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.01□□□□□ -0.33
Atf4Q06507 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Atf4Q06507 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.01□□□□□ -0.33
Atf4Q06507 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Atf4Q06507 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.01□□□□□ -0.33
Atf4Q06507 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.01□□□□□ -0.33
Atf4Q06507 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Atf4Q06507 Carlr-201ENSMUST00000181515 2574 ntBASIC13.01□□□□□ -0.33
Atf4Q06507 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atf4Q06507 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf4Q06507 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Atf4Q06507 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atf4Q06507 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atf4Q06507 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Atf4Q06507 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atf4Q06507 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atf4Q06507 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms