Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a1Q04857 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Col6a1Q04857 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a1Q04857 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a1Q04857 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col6a1Q04857 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a1Q04857 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.87□□□□□ -0.03
Col6a1Q04857 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Col6a1Q04857 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Col6a1Q04857 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.87□□□□□ -0.03
Col6a1Q04857 Gm25261-201ENSMUST00000157416 134 ntBASIC14.87□□□□□ -0.03
Col6a1Q04857 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.87□□□□□ -0.03
Col6a1Q04857 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Gm5363-201ENSMUST00000211927 938 ntBASIC14.87□□□□□ -0.03
Col6a1Q04857 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.87□□□□□ -0.03
Col6a1Q04857 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.87□□□□□ -0.03
Col6a1Q04857 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col6a1Q04857 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col6a1Q04857 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.87□□□□□ -0.03
Col6a1Q04857 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a1Q04857 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.86□□□□□ -0.03
Col6a1Q04857 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.86□□□□□ -0.03
Col6a1Q04857 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.86□□□□□ -0.03
Col6a1Q04857 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.86□□□□□ -0.03
Col6a1Q04857 Gm43138-201ENSMUST00000199123 708 ntBASIC14.86□□□□□ -0.03
Col6a1Q04857 Gm8227-201ENSMUST00000223306 571 ntBASIC14.86□□□□□ -0.03
Col6a1Q04857 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Col6a1Q04857 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Col6a1Q04857 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.86□□□□□ -0.03
Col6a1Q04857 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col6a1Q04857 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a1Q04857 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.85□□□□□ -0.03
Col6a1Q04857 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col6a1Q04857 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.85□□□□□ -0.03
Col6a1Q04857 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col6a1Q04857 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.85□□□□□ -0.03
Col6a1Q04857 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm17376-201ENSMUST00000166016 84 ntBASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.85□□□□□ -0.03
Col6a1Q04857 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm25927-201ENSMUST00000175058 117 ntBASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.85□□□□□ -0.03
Col6a1Q04857 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a1Q04857 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.85□□□□□ -0.03
Col6a1Q04857 Itm2b-204ENSMUST00000228637 783 ntBASIC14.85□□□□□ -0.03
Col6a1Q04857 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms