Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm28760-201ENSMUST00000185995 736 ntBASIC13.7□□□□□ -0.22
Gabpb1Q00420 Gm38144-201ENSMUST00000192790 465 ntBASIC13.7□□□□□ -0.22
Gabpb1Q00420 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.7□□□□□ -0.22
Gabpb1Q00420 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Gm19078-201ENSMUST00000206311 727 ntBASIC13.7□□□□□ -0.22
Gabpb1Q00420 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.7□□□□□ -0.22
Gabpb1Q00420 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.7□□□□□ -0.22
Gabpb1Q00420 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabpb1Q00420 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm11524-201ENSMUST00000119349 807 ntBASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm12403-201ENSMUST00000121384 959 ntBASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.69□□□□□ -0.22
Gabpb1Q00420 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gabpb1Q00420 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.69□□□□□ -0.22
Gabpb1Q00420 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.68□□□□□ -0.22
Gabpb1Q00420 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm22189-201ENSMUST00000103822 86 ntBASIC13.68□□□□□ -0.22
Gabpb1Q00420 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm26464-201ENSMUST00000157094 305 ntBASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.68□□□□□ -0.22
Gabpb1Q00420 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.68□□□□□ -0.22
Gabpb1Q00420 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms