Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim43bP86448 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.9□□□□□ -0.18
Trim43bP86448 Dupd1-202ENSMUST00000224735 548 ntBASIC13.9□□□□□ -0.18
Trim43bP86448 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim43bP86448 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim43bP86448 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trim43bP86448 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trim43bP86448 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Gm15957-201ENSMUST00000118893 974 ntBASIC13.89□□□□□ -0.19
Trim43bP86448 Gm12151-201ENSMUST00000121374 290 ntBASIC13.89□□□□□ -0.19
Trim43bP86448 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim43bP86448 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim43bP86448 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.89□□□□□ -0.19
Trim43bP86448 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim43bP86448 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trim43bP86448 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim43bP86448 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.89□□□□□ -0.19
Trim43bP86448 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43bP86448 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim43bP86448 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim43bP86448 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim43bP86448 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim43bP86448 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.88□□□□□ -0.19
Trim43bP86448 Gm5866-201ENSMUST00000177881 973 ntBASIC13.88□□□□□ -0.19
Trim43bP86448 Gm38294-201ENSMUST00000192831 381 ntBASIC13.88□□□□□ -0.19
Trim43bP86448 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Gm9229-201ENSMUST00000222777 126 ntBASIC13.88□□□□□ -0.19
Trim43bP86448 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim43bP86448 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.88□□□□□ -0.19
Trim43bP86448 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43bP86448 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim43bP86448 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trim43bP86448 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim43bP86448 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.88□□□□□ -0.19
Trim43bP86448 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.87□□□□□ -0.19
Trim43bP86448 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim43bP86448 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim43bP86448 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim43bP86448 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim43bP86448 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim43bP86448 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim43bP86448 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trim43bP86448 Gm14719-201ENSMUST00000121891 340 ntBASIC13.87□□□□□ -0.19
Trim43bP86448 Mir1897-201ENSMUST00000122581 272 ntBASIC13.87□□□□□ -0.19
Trim43bP86448 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms