Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Gbx1P82976 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.69□□□□□ -0.38
Gbx1P82976 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.69□□□□□ -0.38
Gbx1P82976 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.68□□□□□ -0.38
Gbx1P82976 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gbx1P82976 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gbx1P82976 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.68□□□□□ -0.38
Gbx1P82976 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gbx1P82976 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gbx1P82976 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gbx1P82976 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.68□□□□□ -0.38
Gbx1P82976 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.68□□□□□ -0.38
Gbx1P82976 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gbx1P82976 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.68□□□□□ -0.38
Gbx1P82976 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Gbx1P82976 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gbx1P82976 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Gbx1P82976 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.67□□□□□ -0.38
Gbx1P82976 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.67□□□□□ -0.38
Gbx1P82976 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.67□□□□□ -0.38
Gbx1P82976 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gbx1P82976 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gbx1P82976 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.67□□□□□ -0.38
Gbx1P82976 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gbx1P82976 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.67□□□□□ -0.38
Gbx1P82976 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gbx1P82976 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gbx1P82976 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gbx1P82976 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gbx1P82976 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gbx1P82976 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms