Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.58□□□□□ -0.08
CiitaP79621 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Gm43438-201ENSMUST00000198133 379 ntBASIC14.58□□□□□ -0.08
CiitaP79621 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CiitaP79621 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CiitaP79621 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CiitaP79621 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CiitaP79621 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.57□□□□□ -0.08
CiitaP79621 Gm29705-201ENSMUST00000212598 474 ntBASIC14.57□□□□□ -0.08
CiitaP79621 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.57□□□□□ -0.08
CiitaP79621 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CiitaP79621 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CiitaP79621 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.57□□□□□ -0.08
CiitaP79621 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.57□□□□□ -0.08
CiitaP79621 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CiitaP79621 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.57□□□□□ -0.08
CiitaP79621 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CiitaP79621 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.56□□□□□ -0.08
CiitaP79621 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
CiitaP79621 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Gm27731-201ENSMUST00000185192 107 ntBASIC14.56□□□□□ -0.08
CiitaP79621 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.56□□□□□ -0.08
CiitaP79621 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.56□□□□□ -0.08
CiitaP79621 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.56□□□□□ -0.08
CiitaP79621 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.56□□□□□ -0.08
CiitaP79621 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.56□□□□□ -0.08
CiitaP79621 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.56□□□□□ -0.08
CiitaP79621 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CiitaP79621 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.55□□□□□ -0.08
CiitaP79621 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CiitaP79621 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CiitaP79621 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.55□□□□□ -0.08
CiitaP79621 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Gm4271-201ENSMUST00000174444 973 ntBASIC14.55□□□□□ -0.08
CiitaP79621 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Gm37497-201ENSMUST00000195830 798 ntBASIC14.55□□□□□ -0.08
CiitaP79621 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.55□□□□□ -0.08
CiitaP79621 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.55□□□□□ -0.08
CiitaP79621 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.55□□□□□ -0.08
CiitaP79621 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.55□□□□□ -0.08
CiitaP79621 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.55□□□□□ -0.08
CiitaP79621 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms