Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr4P70658 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cxcr4P70658 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr4P70658 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cxcr4P70658 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cxcr4P70658 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Gm15393-201ENSMUST00000120499 219 ntBASIC12.67□□□□□ -0.38
Cxcr4P70658 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.67□□□□□ -0.38
Cxcr4P70658 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.67□□□□□ -0.38
Cxcr4P70658 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cxcr4P70658 Gm20445-201ENSMUST00000061905 565 ntBASIC12.67□□□□□ -0.38
Cxcr4P70658 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.67□□□□□ -0.38
Cxcr4P70658 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cxcr4P70658 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.67□□□□□ -0.38
Cxcr4P70658 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr4P70658 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cxcr4P70658 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.66□□□□□ -0.38
Cxcr4P70658 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Cxcr4P70658 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.66□□□□□ -0.38
Cxcr4P70658 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Cxcr4P70658 Gm12585-201ENSMUST00000117307 290 ntBASIC12.66□□□□□ -0.38
Cxcr4P70658 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.66□□□□□ -0.38
Cxcr4P70658 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.66□□□□□ -0.38
Cxcr4P70658 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cxcr4P70658 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.66□□□□□ -0.38
Cxcr4P70658 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.66□□□□□ -0.38
Cxcr4P70658 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.66□□□□□ -0.38
Cxcr4P70658 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cxcr4P70658 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Cxcr4P70658 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcr4P70658 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cxcr4P70658 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cxcr4P70658 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Cxcr4P70658 Syt7-205ENSMUST00000224135 1557 ntBASIC12.65□□□□□ -0.38
Cxcr4P70658 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.65□□□□□ -0.38
Cxcr4P70658 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Gm15460-201ENSMUST00000118147 391 ntBASIC12.65□□□□□ -0.38
Cxcr4P70658 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Cxcr4P70658 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.65□□□□□ -0.38
Cxcr4P70658 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.65□□□□□ -0.38
Cxcr4P70658 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.65□□□□□ -0.38
Cxcr4P70658 Gm44855-201ENSMUST00000205725 362 ntBASIC12.65□□□□□ -0.38
Cxcr4P70658 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cxcr4P70658 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cxcr4P70658 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.65□□□□□ -0.38
Cxcr4P70658 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcr4P70658 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms