Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Msx3P70354 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.87□□□□□ -0.19
Msx3P70354 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Msx3P70354 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx3P70354 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Msx3P70354 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
Msx3P70354 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.86□□□□□ -0.19
Msx3P70354 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.86□□□□□ -0.19
Msx3P70354 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Msx3P70354 Gm12485-201ENSMUST00000119641 291 ntBASIC13.86□□□□□ -0.19
Msx3P70354 Gm14719-201ENSMUST00000121891 340 ntBASIC13.86□□□□□ -0.19
Msx3P70354 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.86□□□□□ -0.19
Msx3P70354 Gm5279-201ENSMUST00000199575 745 ntBASIC13.86□□□□□ -0.19
Msx3P70354 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.86□□□□□ -0.19
Msx3P70354 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Gm9797-201ENSMUST00000052902 613 ntBASIC13.86□□□□□ -0.19
Msx3P70354 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Msx3P70354 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.86□□□□□ -0.19
Msx3P70354 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.86□□□□□ -0.19
Msx3P70354 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.86□□□□□ -0.19
Msx3P70354 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx3P70354 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Msx3P70354 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.86□□□□□ -0.19
Msx3P70354 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Msx3P70354 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Gm12151-201ENSMUST00000121374 290 ntBASIC13.85□□□□□ -0.19
Msx3P70354 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.85□□□□□ -0.19
Msx3P70354 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.85□□□□□ -0.19
Msx3P70354 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Msx3P70354 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Msx3P70354 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Msx3P70354 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.85□□□□□ -0.19
Msx3P70354 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Msx3P70354 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx3P70354 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms