Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
ThraP63058 Mir6392-201ENSMUST00000184924 108 ntBASIC13.68□□□□□ -0.22
ThraP63058 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.68□□□□□ -0.22
ThraP63058 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.68□□□□□ -0.22
ThraP63058 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ThraP63058 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.68□□□□□ -0.22
ThraP63058 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.68□□□□□ -0.22
ThraP63058 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.68□□□□□ -0.22
ThraP63058 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.68□□□□□ -0.22
ThraP63058 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ThraP63058 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ThraP63058 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ThraP63058 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ThraP63058 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.67□□□□□ -0.22
ThraP63058 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.67□□□□□ -0.22
ThraP63058 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ThraP63058 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.67□□□□□ -0.22
ThraP63058 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Gm15957-201ENSMUST00000118893 974 ntBASIC13.67□□□□□ -0.22
ThraP63058 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.67□□□□□ -0.22
ThraP63058 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.67□□□□□ -0.22
ThraP63058 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.67□□□□□ -0.22
ThraP63058 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ThraP63058 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ThraP63058 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.67□□□□□ -0.22
ThraP63058 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ThraP63058 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
ThraP63058 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Gm11918-201ENSMUST00000121660 179 ntBASIC13.66□□□□□ -0.22
ThraP63058 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ThraP63058 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
ThraP63058 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.66□□□□□ -0.22
ThraP63058 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.66□□□□□ -0.22
ThraP63058 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ThraP63058 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ThraP63058 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ThraP63058 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ThraP63058 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms