Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.18□□□□□ -0.14
Usp46P62069 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.18□□□□□ -0.14
Usp46P62069 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Usp46P62069 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp46P62069 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Gm13829-201ENSMUST00000119600 138 ntBASIC14.18□□□□□ -0.14
Usp46P62069 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Usp46P62069 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.18□□□□□ -0.14
Usp46P62069 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp46P62069 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp46P62069 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usp46P62069 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp46P62069 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp46P62069 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp46P62069 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.17□□□□□ -0.14
Usp46P62069 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.17□□□□□ -0.14
Usp46P62069 Mir1894-201ENSMUST00000122802 81 ntBASIC14.17□□□□□ -0.14
Usp46P62069 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Gm27839-201ENSMUST00000184242 106 ntBASIC14.17□□□□□ -0.14
Usp46P62069 Gm9723-201ENSMUST00000192100 457 ntBASIC14.17□□□□□ -0.14
Usp46P62069 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp46P62069 Gm38223-201ENSMUST00000194484 695 ntBASIC14.17□□□□□ -0.14
Usp46P62069 Gm6266-201ENSMUST00000203844 806 ntBASIC14.17□□□□□ -0.14
Usp46P62069 Gm7287-201ENSMUST00000205267 602 ntBASIC14.17□□□□□ -0.14
Usp46P62069 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp46P62069 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.17□□□□□ -0.14
Usp46P62069 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp46P62069 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp46P62069 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Usp46P62069 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp46P62069 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Usp46P62069 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Usp46P62069 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp46P62069 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp46P62069 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp46P62069 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.16□□□□□ -0.14
Usp46P62069 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp46P62069 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp46P62069 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp46P62069 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp46P62069 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp46P62069 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.16□□□□□ -0.14
Usp46P62069 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp46P62069 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usp46P62069 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp46P62069 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp46P62069 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.16□□□□□ -0.14
Usp46P62069 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Usp46P62069 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Usp46P62069 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp46P62069 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp46P62069 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp46P62069 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp46P62069 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms