Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.86□□□□□ -0.67
Lmo4P61969 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.86□□□□□ -0.67
Lmo4P61969 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.86□□□□□ -0.67
Lmo4P61969 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.86□□□□□ -0.67
Lmo4P61969 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Gm43118-201ENSMUST00000199149 775 ntBASIC10.86□□□□□ -0.67
Lmo4P61969 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.86□□□□□ -0.67
Lmo4P61969 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Lmo4P61969 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.86□□□□□ -0.67
Lmo4P61969 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Lmo4P61969 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Lmo4P61969 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Lmo4P61969 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Lmo4P61969 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Lmo4P61969 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Lmo4P61969 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.85□□□□□ -0.67
Lmo4P61969 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.85□□□□□ -0.67
Lmo4P61969 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Gm42627-201ENSMUST00000197347 224 ntBASIC10.85□□□□□ -0.67
Lmo4P61969 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.85□□□□□ -0.67
Lmo4P61969 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.85□□□□□ -0.67
Lmo4P61969 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.85□□□□□ -0.67
Lmo4P61969 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.85□□□□□ -0.67
Lmo4P61969 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.85□□□□□ -0.67
Lmo4P61969 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.85□□□□□ -0.67
Lmo4P61969 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Lmo4P61969 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.85□□□□□ -0.67
Lmo4P61969 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.85□□□□□ -0.67
Lmo4P61969 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lmo4P61969 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.84□□□□□ -0.67
Lmo4P61969 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.84□□□□□ -0.67
Lmo4P61969 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.84□□□□□ -0.67
Lmo4P61969 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Lmo4P61969 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Lmo4P61969 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Lmo4P61969 Gm11637-201ENSMUST00000120601 592 ntBASIC10.84□□□□□ -0.67
Lmo4P61969 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.84□□□□□ -0.67
Lmo4P61969 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Lmo4P61969 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.84□□□□□ -0.67
Lmo4P61969 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.84□□□□□ -0.67
Lmo4P61969 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Gm27501-201ENSMUST00000183599 107 ntBASIC10.84□□□□□ -0.67
Lmo4P61969 Gm43133-201ENSMUST00000197472 463 ntBASIC10.84□□□□□ -0.67
Lmo4P61969 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Lmo4P61969 Gm45930-201ENSMUST00000221330 292 ntBASIC10.84□□□□□ -0.67
Lmo4P61969 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms