Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Tpm1P58771 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.03■□□□□ -0
Tpm1P58771 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Rprl2-201ENSMUST00000157150 290 ntBASIC15.03■□□□□ -0
Tpm1P58771 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.03■□□□□ -0
Tpm1P58771 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Tpm1P58771 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tpm1P58771 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.02■□□□□ -0
Tpm1P58771 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.02■□□□□ -0
Tpm1P58771 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 Gm1401-201ENSMUST00000122048 772 ntBASIC15.02■□□□□ -0
Tpm1P58771 Gm18049-201ENSMUST00000208909 581 ntBASIC15.02■□□□□ -0
Tpm1P58771 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.02■□□□□ -0
Tpm1P58771 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.02■□□□□ -0
Tpm1P58771 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tpm1P58771 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tpm1P58771 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.02□□□□□ -0.01
Tpm1P58771 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.02□□□□□ -0.01
Tpm1P58771 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tpm1P58771 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tpm1P58771 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.02□□□□□ -0.01
Tpm1P58771 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tpm1P58771 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
Tpm1P58771 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tpm1P58771 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tpm1P58771 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tpm1P58771 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.02□□□□□ -0.01
Tpm1P58771 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tpm1P58771 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Tpm1P58771 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.01□□□□□ -0.01
Tpm1P58771 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Tpm1P58771 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Tpm1P58771 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.01□□□□□ -0.01
Tpm1P58771 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.01□□□□□ -0.01
Tpm1P58771 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Tpm1P58771 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.01□□□□□ -0.01
Tpm1P58771 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Gm27631-201ENSMUST00000184163 466 ntBASIC15.01□□□□□ -0.01
Tpm1P58771 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.01□□□□□ -0.01
Tpm1P58771 Gm45612-201ENSMUST00000211320 160 ntBASIC15.01□□□□□ -0.01
Tpm1P58771 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.01□□□□□ -0.01
Tpm1P58771 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.01□□□□□ -0.01
Tpm1P58771 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.01□□□□□ -0.01
Tpm1P58771 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tpm1P58771 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm1P58771 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms