Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.5■□□□□ 0.23
Tm6sf1P58749 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.5■□□□□ 0.23
Tm6sf1P58749 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.5■□□□□ 0.23
Tm6sf1P58749 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tm6sf1P58749 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.5■□□□□ 0.23
Tm6sf1P58749 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.5■□□□□ 0.23
Tm6sf1P58749 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Gm6152-201ENSMUST00000151704 340 ntBASIC16.49■□□□□ 0.23
Tm6sf1P58749 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.49■□□□□ 0.23
Tm6sf1P58749 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.49■□□□□ 0.23
Tm6sf1P58749 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.49■□□□□ 0.23
Tm6sf1P58749 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tm6sf1P58749 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Gm14350-201ENSMUST00000116642 640 ntBASIC16.48■□□□□ 0.23
Tm6sf1P58749 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Gm9794-201ENSMUST00000202370 423 ntBASIC16.48■□□□□ 0.23
Tm6sf1P58749 Gm7287-201ENSMUST00000205267 602 ntBASIC16.48■□□□□ 0.23
Tm6sf1P58749 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.48■□□□□ 0.23
Tm6sf1P58749 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tm6sf1P58749 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tm6sf1P58749 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tm6sf1P58749 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tm6sf1P58749 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tm6sf1P58749 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tm6sf1P58749 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tm6sf1P58749 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tm6sf1P58749 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tm6sf1P58749 Gm12490-201ENSMUST00000120255 560 ntBASIC16.47■□□□□ 0.23
Tm6sf1P58749 Gm11918-201ENSMUST00000121660 179 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms