Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.9□□□□□ -0.66
Sssca1P56873 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sssca1P56873 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sssca1P56873 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sssca1P56873 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.9□□□□□ -0.66
Sssca1P56873 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.9□□□□□ -0.67
Sssca1P56873 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sssca1P56873 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.89□□□□□ -0.67
Sssca1P56873 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Gm25287-201ENSMUST00000103846 110 ntBASIC10.89□□□□□ -0.67
Sssca1P56873 Gm22918-201ENSMUST00000103855 110 ntBASIC10.89□□□□□ -0.67
Sssca1P56873 Mir1895-201ENSMUST00000122615 79 ntBASIC10.89□□□□□ -0.67
Sssca1P56873 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.89□□□□□ -0.67
Sssca1P56873 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.89□□□□□ -0.67
Sssca1P56873 Gm18766-201ENSMUST00000189811 808 ntBASIC10.89□□□□□ -0.67
Sssca1P56873 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.89□□□□□ -0.67
Sssca1P56873 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.89□□□□□ -0.67
Sssca1P56873 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.89□□□□□ -0.67
Sssca1P56873 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.89□□□□□ -0.67
Sssca1P56873 Dupd1-202ENSMUST00000224735 548 ntBASIC10.89□□□□□ -0.67
Sssca1P56873 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Gm10175-201ENSMUST00000086013 645 ntBASIC10.89□□□□□ -0.67
Sssca1P56873 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Sssca1P56873 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sssca1P56873 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sssca1P56873 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.89□□□□□ -0.67
Sssca1P56873 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Sssca1P56873 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sssca1P56873 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Sssca1P56873 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Sssca1P56873 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.88□□□□□ -0.67
Sssca1P56873 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sssca1P56873 Gm33320-201ENSMUST00000192232 530 ntBASIC10.88□□□□□ -0.67
Sssca1P56873 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.88□□□□□ -0.67
Sssca1P56873 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.88□□□□□ -0.67
Sssca1P56873 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sssca1P56873 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Sssca1P56873 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sssca1P56873 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sssca1P56873 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms