Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cks2P56390 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Gm24543-201ENSMUST00000103867 82 ntBASIC11.25□□□□□ -0.61
Cks2P56390 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Gm15460-201ENSMUST00000118147 391 ntBASIC11.25□□□□□ -0.61
Cks2P56390 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.25□□□□□ -0.61
Cks2P56390 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.25□□□□□ -0.61
Cks2P56390 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.25□□□□□ -0.61
Cks2P56390 Gm29541-201ENSMUST00000191351 678 ntBASIC11.25□□□□□ -0.61
Cks2P56390 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.25□□□□□ -0.61
Cks2P56390 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Cks2P56390 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks2P56390 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cks2P56390 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.24□□□□□ -0.61
Cks2P56390 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.24□□□□□ -0.61
Cks2P56390 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.24□□□□□ -0.61
Cks2P56390 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.24□□□□□ -0.61
Cks2P56390 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.24□□□□□ -0.61
Cks2P56390 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.24□□□□□ -0.61
Cks2P56390 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.24□□□□□ -0.61
Cks2P56390 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cks2P56390 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cks2P56390 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cks2P56390 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Cks2P56390 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cks2P56390 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.24□□□□□ -0.61
Cks2P56390 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.24□□□□□ -0.61
Cks2P56390 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.24□□□□□ -0.61
Cks2P56390 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks2P56390 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cks2P56390 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.23□□□□□ -0.61
Cks2P56390 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.23□□□□□ -0.61
Cks2P56390 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cks2P56390 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Cks2P56390 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks2P56390 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cks2P56390 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms