Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.35□□□□□ -0.11
NrlP54846 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.35□□□□□ -0.11
NrlP54846 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
NrlP54846 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NrlP54846 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.34□□□□□ -0.11
NrlP54846 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Gm12203-201ENSMUST00000118235 598 ntBASIC14.34□□□□□ -0.11
NrlP54846 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.34□□□□□ -0.11
NrlP54846 Gm12209-201ENSMUST00000120089 596 ntBASIC14.34□□□□□ -0.11
NrlP54846 Gm1335-201ENSMUST00000121653 386 ntBASIC14.34□□□□□ -0.11
NrlP54846 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.34□□□□□ -0.11
NrlP54846 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.34□□□□□ -0.11
NrlP54846 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Gm17330-201ENSMUST00000221047 165 ntBASIC14.34□□□□□ -0.11
NrlP54846 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NrlP54846 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.34□□□□□ -0.11
NrlP54846 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NrlP54846 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NrlP54846 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NrlP54846 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NrlP54846 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NrlP54846 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NrlP54846 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NrlP54846 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.33□□□□□ -0.12
NrlP54846 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.33□□□□□ -0.12
NrlP54846 Gm4271-201ENSMUST00000174444 973 ntBASIC14.33□□□□□ -0.12
NrlP54846 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.33□□□□□ -0.12
NrlP54846 Gm38144-201ENSMUST00000192790 465 ntBASIC14.33□□□□□ -0.12
NrlP54846 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.33□□□□□ -0.12
NrlP54846 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.33□□□□□ -0.12
NrlP54846 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.33□□□□□ -0.12
NrlP54846 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NrlP54846 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.33□□□□□ -0.12
NrlP54846 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NrlP54846 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NrlP54846 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.32□□□□□ -0.12
NrlP54846 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.32□□□□□ -0.12
NrlP54846 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NrlP54846 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.32□□□□□ -0.12
NrlP54846 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.32□□□□□ -0.12
NrlP54846 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.32□□□□□ -0.12
NrlP54846 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.32□□□□□ -0.12
NrlP54846 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.32□□□□□ -0.12
NrlP54846 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NrlP54846 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NrlP54846 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms