Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.96■□□□□ 0.31
Msh6P54276 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.96■□□□□ 0.31
Msh6P54276 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Msh6P54276 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.96■□□□□ 0.31
Msh6P54276 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.96■□□□□ 0.31
Msh6P54276 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Msh6P54276 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Msh6P54276 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh6P54276 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.95■□□□□ 0.3
Msh6P54276 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Msh6P54276 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh6P54276 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Msh6P54276 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh6P54276 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh6P54276 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.95■□□□□ 0.3
Msh6P54276 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.95■□□□□ 0.3
Msh6P54276 Gm14381-201ENSMUST00000122105 414 ntBASIC16.95■□□□□ 0.3
Msh6P54276 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.95■□□□□ 0.3
Msh6P54276 Gm7809-201ENSMUST00000153199 742 ntBASIC16.95■□□□□ 0.3
Msh6P54276 Mir5132-201ENSMUST00000175166 71 ntBASIC16.95■□□□□ 0.3
Msh6P54276 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.95■□□□□ 0.3
Msh6P54276 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.95■□□□□ 0.3
Msh6P54276 Gm44069-201ENSMUST00000204898 506 ntBASIC16.95■□□□□ 0.3
Msh6P54276 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.95■□□□□ 0.3
Msh6P54276 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.95■□□□□ 0.3
Msh6P54276 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.95■□□□□ 0.3
Msh6P54276 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Msh6P54276 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh6P54276 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh6P54276 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh6P54276 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh6P54276 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh6P54276 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh6P54276 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Msh6P54276 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Msh6P54276 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Msh6P54276 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.94■□□□□ 0.3
Msh6P54276 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Gm4986-201ENSMUST00000119731 549 ntBASIC16.94■□□□□ 0.3
Msh6P54276 Gm2231-201ENSMUST00000125661 612 ntBASIC16.94■□□□□ 0.3
Msh6P54276 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.94■□□□□ 0.3
Msh6P54276 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.94■□□□□ 0.3
Msh6P54276 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Msh6P54276 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Msh6P54276 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Mir433-201ENSMUST00000093564 124 ntBASIC16.94■□□□□ 0.3
Msh6P54276 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Msh6P54276 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Msh6P54276 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.94■□□□□ 0.3
Msh6P54276 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Msh6P54276 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.94■□□□□ 0.3
Msh6P54276 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.94■□□□□ 0.3
Msh6P54276 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh6P54276 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.93■□□□□ 0.3
Msh6P54276 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Gm3890-201ENSMUST00000182416 207 ntBASIC16.93■□□□□ 0.3
Msh6P54276 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Gm3786-201ENSMUST00000202659 378 ntBASIC16.93■□□□□ 0.3
Msh6P54276 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.93■□□□□ 0.3
Msh6P54276 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.93■□□□□ 0.3
Msh6P54276 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.93■□□□□ 0.3
Msh6P54276 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms