Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Fdft1P53798 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.5□□□□□ -0.25
Fdft1P53798 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.5□□□□□ -0.25
Fdft1P53798 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Fdft1P53798 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Fdft1P53798 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.5□□□□□ -0.25
Fdft1P53798 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.5□□□□□ -0.25
Fdft1P53798 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.5□□□□□ -0.25
Fdft1P53798 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Fdft1P53798 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Fdft1P53798 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Fdft1P53798 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.49□□□□□ -0.25
Fdft1P53798 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.49□□□□□ -0.25
Fdft1P53798 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.49□□□□□ -0.25
Fdft1P53798 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Gm44719-201ENSMUST00000206404 149 ntBASIC13.49□□□□□ -0.25
Fdft1P53798 Gm44872-201ENSMUST00000207864 420 ntBASIC13.49□□□□□ -0.25
Fdft1P53798 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.49□□□□□ -0.25
Fdft1P53798 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.49□□□□□ -0.25
Fdft1P53798 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Fdft1P53798 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.49□□□□□ -0.25
Fdft1P53798 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.49□□□□□ -0.25
Fdft1P53798 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Fdft1P53798 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.48□□□□□ -0.25
Fdft1P53798 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Fdft1P53798 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.48□□□□□ -0.25
Fdft1P53798 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.48□□□□□ -0.25
Fdft1P53798 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Fdft1P53798 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.48□□□□□ -0.25
Fdft1P53798 Gm27306-201ENSMUST00000183970 107 ntBASIC13.48□□□□□ -0.25
Fdft1P53798 Gm27989-201ENSMUST00000184721 107 ntBASIC13.48□□□□□ -0.25
Fdft1P53798 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Gm5425-201ENSMUST00000214125 459 ntBASIC13.48□□□□□ -0.25
Fdft1P53798 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Fdft1P53798 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.48□□□□□ -0.25
Fdft1P53798 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Fdft1P53798 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.48□□□□□ -0.25
Fdft1P53798 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.48□□□□□ -0.25
Fdft1P53798 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Fdft1P53798 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms