Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lbx1P52955 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lbx1P52955 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lbx1P52955 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lbx1P52955 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lbx1P52955 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lbx1P52955 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Lbx1P52955 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lbx1P52955 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Lbx1P52955 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lbx1P52955 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lbx1P52955 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lbx1P52955 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lbx1P52955 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lbx1P52955 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.02□□□□□ -0.32
Lbx1P52955 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lbx1P52955 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lbx1P52955 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lbx1P52955 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lbx1P52955 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.02□□□□□ -0.33
Lbx1P52955 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.02□□□□□ -0.33
Lbx1P52955 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.02□□□□□ -0.33
Lbx1P52955 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.02□□□□□ -0.33
Lbx1P52955 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.02□□□□□ -0.33
Lbx1P52955 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.02□□□□□ -0.33
Lbx1P52955 Gm8492-201ENSMUST00000182375 987 ntBASIC13.02□□□□□ -0.33
Lbx1P52955 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lbx1P52955 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.02□□□□□ -0.33
Lbx1P52955 Gm43610-201ENSMUST00000199117 365 ntBASIC13.02□□□□□ -0.33
Lbx1P52955 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.02□□□□□ -0.33
Lbx1P52955 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.02□□□□□ -0.33
Lbx1P52955 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lbx1P52955 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lbx1P52955 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lbx1P52955 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lbx1P52955 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lbx1P52955 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lbx1P52955 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
Lbx1P52955 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lbx1P52955 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.02□□□□□ -0.33
Lbx1P52955 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lbx1P52955 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lbx1P52955 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lbx1P52955 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lbx1P52955 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lbx1P52955 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.02□□□□□ -0.33
Lbx1P52955 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.01□□□□□ -0.33
Lbx1P52955 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lbx1P52955 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Lbx1P52955 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.01□□□□□ -0.33
Lbx1P52955 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.01□□□□□ -0.33
Lbx1P52955 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Lbx1P52955 Gm14460-201ENSMUST00000121511 639 ntBASIC13.01□□□□□ -0.33
Lbx1P52955 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.01□□□□□ -0.33
Lbx1P52955 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.01□□□□□ -0.33
Lbx1P52955 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Gm29608-201ENSMUST00000190444 463 ntBASIC13.01□□□□□ -0.33
Lbx1P52955 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Gm19287-201ENSMUST00000203190 358 ntBASIC13.01□□□□□ -0.33
Lbx1P52955 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.01□□□□□ -0.33
Lbx1P52955 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Lbx1P52955 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.01□□□□□ -0.33
Lbx1P52955 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lbx1P52955 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lbx1P52955 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lbx1P52955 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lbx1P52955 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lbx1P52955 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lbx1P52955 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13□□□□□ -0.33
Lbx1P52955 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lbx1P52955 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lbx1P52955 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lbx1P52955 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lbx1P52955 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lbx1P52955 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lbx1P52955 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lbx1P52955 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lbx1P52955 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lbx1P52955 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lbx1P52955 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms