Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.46□□□□□ -0.57
Hmga2P52927 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hmga2P52927 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hmga2P52927 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Hmga2P52927 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Hmga2P52927 Gm13385-201ENSMUST00000121089 220 ntBASIC11.46□□□□□ -0.57
Hmga2P52927 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.46□□□□□ -0.57
Hmga2P52927 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.46□□□□□ -0.57
Hmga2P52927 Gm29541-201ENSMUST00000191351 678 ntBASIC11.46□□□□□ -0.57
Hmga2P52927 Gm33320-201ENSMUST00000192232 530 ntBASIC11.46□□□□□ -0.57
Hmga2P52927 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.46□□□□□ -0.57
Hmga2P52927 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmga2P52927 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.46□□□□□ -0.57
Hmga2P52927 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.46□□□□□ -0.57
Hmga2P52927 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.46□□□□□ -0.57
Hmga2P52927 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hmga2P52927 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hmga2P52927 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmga2P52927 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Hmga2P52927 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.46□□□□□ -0.58
Hmga2P52927 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Hmga2P52927 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hmga2P52927 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Gm15460-201ENSMUST00000118147 391 ntBASIC11.45□□□□□ -0.58
Hmga2P52927 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Hmga2P52927 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.45□□□□□ -0.58
Hmga2P52927 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.45□□□□□ -0.58
Hmga2P52927 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.45□□□□□ -0.58
Hmga2P52927 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.45□□□□□ -0.58
Hmga2P52927 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Hmga2P52927 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmga2P52927 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hmga2P52927 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Hmga2P52927 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmga2P52927 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmga2P52927 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmga2P52927 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms