Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.25□□□□□ -0.13
Shmt1P50431 Gm5687-201ENSMUST00000118252 640 ntBASIC14.25□□□□□ -0.13
Shmt1P50431 Gm13612-201ENSMUST00000119276 390 ntBASIC14.25□□□□□ -0.13
Shmt1P50431 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.25□□□□□ -0.13
Shmt1P50431 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.25□□□□□ -0.13
Shmt1P50431 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.25□□□□□ -0.13
Shmt1P50431 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.25□□□□□ -0.13
Shmt1P50431 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Shmt1P50431 Gm27839-201ENSMUST00000184242 106 ntBASIC14.25□□□□□ -0.13
Shmt1P50431 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.25□□□□□ -0.13
Shmt1P50431 Gm8598-201ENSMUST00000221184 836 ntBASIC14.25□□□□□ -0.13
Shmt1P50431 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt1P50431 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt1P50431 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Shmt1P50431 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Shmt1P50431 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.25□□□□□ -0.13
Shmt1P50431 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt1P50431 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt1P50431 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt1P50431 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt1P50431 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt1P50431 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.25□□□□□ -0.13
Shmt1P50431 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shmt1P50431 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.24□□□□□ -0.13
Shmt1P50431 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Gm4984-201ENSMUST00000115987 360 ntBASIC14.24□□□□□ -0.13
Shmt1P50431 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.24□□□□□ -0.13
Shmt1P50431 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Shmt1P50431 Gm6152-201ENSMUST00000151704 340 ntBASIC14.24□□□□□ -0.13
Shmt1P50431 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.24□□□□□ -0.13
Shmt1P50431 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.24□□□□□ -0.13
Shmt1P50431 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.24□□□□□ -0.13
Shmt1P50431 Gm38671-201ENSMUST00000200573 130 ntBASIC14.24□□□□□ -0.13
Shmt1P50431 Gm18473-201ENSMUST00000220543 868 ntBASIC14.24□□□□□ -0.13
Shmt1P50431 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.24□□□□□ -0.13
Shmt1P50431 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt1P50431 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Shmt1P50431 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shmt1P50431 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.23□□□□□ -0.13
Shmt1P50431 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.23□□□□□ -0.13
Shmt1P50431 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Shmt1P50431 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Shmt1P50431 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.23□□□□□ -0.13
Shmt1P50431 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.23□□□□□ -0.13
Shmt1P50431 Gm11425-201ENSMUST00000119608 498 ntBASIC14.23□□□□□ -0.13
Shmt1P50431 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.23□□□□□ -0.13
Shmt1P50431 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Gm9396-201ENSMUST00000076703 567 ntBASIC14.23□□□□□ -0.13
Shmt1P50431 Gm10012-201ENSMUST00000078252 192 ntBASIC14.23□□□□□ -0.13
Shmt1P50431 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.23□□□□□ -0.13
Shmt1P50431 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Shmt1P50431 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Shmt1P50431 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Shmt1P50431 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.23□□□□□ -0.13
Shmt1P50431 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shmt1P50431 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms