Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.84□□□□□ -0.51
GdnfP48540 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
GdnfP48540 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.84□□□□□ -0.51
GdnfP48540 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Gm6415-201ENSMUST00000118488 348 ntBASIC11.84□□□□□ -0.51
GdnfP48540 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.84□□□□□ -0.51
GdnfP48540 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.84□□□□□ -0.51
GdnfP48540 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.84□□□□□ -0.51
GdnfP48540 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
GdnfP48540 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
GdnfP48540 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.84□□□□□ -0.51
GdnfP48540 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
GdnfP48540 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
GdnfP48540 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
GdnfP48540 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.83□□□□□ -0.52
GdnfP48540 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
GdnfP48540 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.83□□□□□ -0.52
GdnfP48540 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.83□□□□□ -0.52
GdnfP48540 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.83□□□□□ -0.52
GdnfP48540 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.83□□□□□ -0.52
GdnfP48540 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
GdnfP48540 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.83□□□□□ -0.52
GdnfP48540 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.83□□□□□ -0.52
GdnfP48540 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
GdnfP48540 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
GdnfP48540 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
GdnfP48540 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
GdnfP48540 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
GdnfP48540 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
GdnfP48540 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
GdnfP48540 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
GdnfP48540 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.82□□□□□ -0.52
GdnfP48540 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
GdnfP48540 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.82□□□□□ -0.52
GdnfP48540 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.82□□□□□ -0.52
GdnfP48540 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Gm2445-201ENSMUST00000182798 989 ntBASIC11.82□□□□□ -0.52
GdnfP48540 Gm27631-201ENSMUST00000184163 466 ntBASIC11.82□□□□□ -0.52
GdnfP48540 Gm38294-201ENSMUST00000192831 381 ntBASIC11.82□□□□□ -0.52
GdnfP48540 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.82□□□□□ -0.52
GdnfP48540 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.82□□□□□ -0.52
GdnfP48540 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.82□□□□□ -0.52
GdnfP48540 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms