Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prox1P48437 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Prox1P48437 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Prox1P48437 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prox1P48437 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prox1P48437 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Prox1P48437 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Prox1P48437 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.96□□□□□ -0.34
Prox1P48437 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prox1P48437 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Prox1P48437 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prox1P48437 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prox1P48437 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prox1P48437 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.95□□□□□ -0.34
Prox1P48437 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.95□□□□□ -0.34
Prox1P48437 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.95□□□□□ -0.34
Prox1P48437 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.95□□□□□ -0.34
Prox1P48437 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.95□□□□□ -0.34
Prox1P48437 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Gm13823-201ENSMUST00000119930 345 ntBASIC12.95□□□□□ -0.34
Prox1P48437 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.95□□□□□ -0.34
Prox1P48437 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.95□□□□□ -0.34
Prox1P48437 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.95□□□□□ -0.34
Prox1P48437 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.95□□□□□ -0.34
Prox1P48437 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.95□□□□□ -0.34
Prox1P48437 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Prox1P48437 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Prox1P48437 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.95□□□□□ -0.34
Prox1P48437 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.95□□□□□ -0.34
Prox1P48437 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Prox1P48437 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prox1P48437 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Prox1P48437 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.94□□□□□ -0.34
Prox1P48437 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prox1P48437 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prox1P48437 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.94□□□□□ -0.34
Prox1P48437 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.94□□□□□ -0.34
Prox1P48437 Gm15920-201ENSMUST00000118998 402 ntBASIC12.94□□□□□ -0.34
Prox1P48437 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.94□□□□□ -0.34
Prox1P48437 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.94□□□□□ -0.34
Prox1P48437 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.94□□□□□ -0.34
Prox1P48437 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.94□□□□□ -0.34
Prox1P48437 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.94□□□□□ -0.34
Prox1P48437 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.94□□□□□ -0.34
Prox1P48437 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Prox1P48437 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prox1P48437 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.94□□□□□ -0.34
Prox1P48437 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prox1P48437 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prox1P48437 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.93□□□□□ -0.34
Prox1P48437 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms