Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vps4bP46467 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps4bP46467 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps4bP46467 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.69□□□□□ -0.22
Vps4bP46467 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vps4bP46467 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vps4bP46467 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.69□□□□□ -0.22
Vps4bP46467 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Vps4bP46467 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Gm27772-201ENSMUST00000184900 187 ntBASIC13.69□□□□□ -0.22
Vps4bP46467 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.69□□□□□ -0.22
Vps4bP46467 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Vps4bP46467 Gm43703-201ENSMUST00000200523 763 ntBASIC13.69□□□□□ -0.22
Vps4bP46467 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.69□□□□□ -0.22
Vps4bP46467 Gm6888-201ENSMUST00000221983 706 ntBASIC13.69□□□□□ -0.22
Vps4bP46467 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps4bP46467 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vps4bP46467 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vps4bP46467 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps4bP46467 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vps4bP46467 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4bP46467 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vps4bP46467 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Vps4bP46467 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.68□□□□□ -0.22
Vps4bP46467 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps4bP46467 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps4bP46467 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps4bP46467 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.68□□□□□ -0.22
Vps4bP46467 Gm13453-201ENSMUST00000118708 357 ntBASIC13.68□□□□□ -0.22
Vps4bP46467 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps4bP46467 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Vps4bP46467 Gm18905-201ENSMUST00000205454 928 ntBASIC13.68□□□□□ -0.22
Vps4bP46467 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps4bP46467 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.68□□□□□ -0.22
Vps4bP46467 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4bP46467 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4bP46467 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4bP46467 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4bP46467 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps4bP46467 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms