Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Gm37965-201ENSMUST00000195304 1362 ntBASIC12.97□□□□□ -0.33
Sox18P43680 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox18P43680 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox18P43680 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Sox18P43680 Gm25261-201ENSMUST00000157416 134 ntBASIC12.97□□□□□ -0.33
Sox18P43680 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.97□□□□□ -0.33
Sox18P43680 Gm29107-201ENSMUST00000190910 347 ntBASIC12.97□□□□□ -0.33
Sox18P43680 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox18P43680 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.97□□□□□ -0.33
Sox18P43680 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC12.97□□□□□ -0.33
Sox18P43680 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox18P43680 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.97□□□□□ -0.33
Sox18P43680 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.97□□□□□ -0.33
Sox18P43680 Itm2b-204ENSMUST00000228637 783 ntBASIC12.97□□□□□ -0.33
Sox18P43680 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox18P43680 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox18P43680 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox18P43680 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.97□□□□□ -0.33
Sox18P43680 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Sox18P43680 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sox18P43680 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sox18P43680 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox18P43680 Gm15370-201ENSMUST00000117158 253 ntBASIC12.96□□□□□ -0.33
Sox18P43680 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Sox18P43680 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.96□□□□□ -0.33
Sox18P43680 Gm16379-201ENSMUST00000161469 348 ntBASIC12.96□□□□□ -0.33
Sox18P43680 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Sox18P43680 Mir6979-201ENSMUST00000183927 56 ntBASIC12.96□□□□□ -0.33
Sox18P43680 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Gm8762-201ENSMUST00000193486 339 ntBASIC12.96□□□□□ -0.33
Sox18P43680 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.96□□□□□ -0.33
Sox18P43680 Gm43084-201ENSMUST00000200696 947 ntBASIC12.96□□□□□ -0.33
Sox18P43680 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC12.96□□□□□ -0.33
Sox18P43680 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC12.96□□□□□ -0.33
Sox18P43680 Gm9520-201ENSMUST00000209460 1253 ntBASIC12.96□□□□□ -0.33
Sox18P43680 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.96□□□□□ -0.33
Sox18P43680 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.96□□□□□ -0.33
Sox18P43680 AC102542.1-201ENSMUST00000225204 1138 ntBASIC12.96□□□□□ -0.33
Sox18P43680 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox18P43680 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sox18P43680 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.96□□□□□ -0.34
Sox18P43680 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox18P43680 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox18P43680 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox18P43680 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox18P43680 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.96□□□□□ -0.34
Sox18P43680 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
Sox18P43680 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox18P43680 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox18P43680 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.95□□□□□ -0.34
Sox18P43680 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Sox18P43680 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox18P43680 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox18P43680 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox18P43680 Gm13297-201ENSMUST00000120205 934 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms