Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.14□□□□□ -0.63
Hist1h1aP43275 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.13□□□□□ -0.63
Hist1h1aP43275 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Gm5566-201ENSMUST00000116118 459 ntBASIC11.13□□□□□ -0.63
Hist1h1aP43275 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hist1h1aP43275 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.12□□□□□ -0.63
Hist1h1aP43275 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.12□□□□□ -0.63
Hist1h1aP43275 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Gm24158-201ENSMUST00000175263 71 ntBASIC11.12□□□□□ -0.63
Hist1h1aP43275 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Dupd1-202ENSMUST00000224735 548 ntBASIC11.12□□□□□ -0.63
Hist1h1aP43275 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.12□□□□□ -0.63
Hist1h1aP43275 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms