Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.97□□□□□ -0.17
HttP42859 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.97□□□□□ -0.17
HttP42859 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.97□□□□□ -0.17
HttP42859 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HttP42859 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.97□□□□□ -0.17
HttP42859 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.97□□□□□ -0.17
HttP42859 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.97□□□□□ -0.17
HttP42859 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.97□□□□□ -0.17
HttP42859 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.97□□□□□ -0.17
HttP42859 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HttP42859 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.97□□□□□ -0.17
HttP42859 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HttP42859 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.97□□□□□ -0.17
HttP42859 Ginm1-202ENSMUST00000065124 300 ntBASIC13.97□□□□□ -0.17
HttP42859 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.96□□□□□ -0.17
HttP42859 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Gm43610-201ENSMUST00000199117 365 ntBASIC13.96□□□□□ -0.17
HttP42859 Gm5904-201ENSMUST00000210286 865 ntBASIC13.96□□□□□ -0.17
HttP42859 Gm1821-202ENSMUST00000227415 750 ntBASIC13.96□□□□□ -0.17
HttP42859 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HttP42859 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.96□□□□□ -0.18
HttP42859 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HttP42859 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HttP42859 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HttP42859 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HttP42859 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HttP42859 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.96□□□□□ -0.18
HttP42859 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HttP42859 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HttP42859 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HttP42859 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HttP42859 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HttP42859 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.95□□□□□ -0.18
HttP42859 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HttP42859 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HttP42859 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HttP42859 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.95□□□□□ -0.18
HttP42859 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Gm28324-201ENSMUST00000187913 264 ntBASIC13.95□□□□□ -0.18
HttP42859 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.95□□□□□ -0.18
HttP42859 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.95□□□□□ -0.18
HttP42859 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HttP42859 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.94□□□□□ -0.18
HttP42859 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.94□□□□□ -0.18
HttP42859 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HttP42859 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms