Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Gm13453-201ENSMUST00000118708 357 ntBASIC12.68□□□□□ -0.38
Sox6P40645 Mir1897-201ENSMUST00000122581 272 ntBASIC12.68□□□□□ -0.38
Sox6P40645 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.68□□□□□ -0.38
Sox6P40645 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.68□□□□□ -0.38
Sox6P40645 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.68□□□□□ -0.38
Sox6P40645 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sox6P40645 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.68□□□□□ -0.38
Sox6P40645 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.67□□□□□ -0.38
Sox6P40645 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sox6P40645 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sox6P40645 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox6P40645 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.67□□□□□ -0.38
Sox6P40645 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sox6P40645 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.67□□□□□ -0.38
Sox6P40645 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Gm44608-201ENSMUST00000206827 855 ntBASIC12.67□□□□□ -0.38
Sox6P40645 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox6P40645 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.67□□□□□ -0.38
Sox6P40645 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Sox6P40645 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.67□□□□□ -0.38
Sox6P40645 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Sox6P40645 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Sox6P40645 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox6P40645 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Sox6P40645 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Sox6P40645 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sox6P40645 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sox6P40645 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sox6P40645 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox6P40645 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.66□□□□□ -0.38
Sox6P40645 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms