Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdh4P39038 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.92□□□□□ -0.34
Cdh4P39038 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Cdh4P39038 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh4P39038 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cdh4P39038 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cdh4P39038 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdh4P39038 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdh4P39038 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.91□□□□□ -0.34
Cdh4P39038 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdh4P39038 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.91□□□□□ -0.34
Cdh4P39038 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.91□□□□□ -0.34
Cdh4P39038 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cdh4P39038 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Cdh4P39038 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cdh4P39038 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdh4P39038 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh4P39038 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdh4P39038 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Cdh4P39038 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.9□□□□□ -0.34
Cdh4P39038 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cdh4P39038 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Cdh4P39038 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdh4P39038 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cdh4P39038 Gm9908-201ENSMUST00000211534 448 ntBASIC12.9□□□□□ -0.34
Cdh4P39038 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cdh4P39038 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdh4P39038 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh4P39038 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cdh4P39038 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cdh4P39038 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Cdh4P39038 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdh4P39038 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cdh4P39038 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Cdh4P39038 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Cdh4P39038 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms