Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Thbs1P35441 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.5□□□□□ -0.41
Thbs1P35441 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Thbs1P35441 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Thbs1P35441 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Thbs1P35441 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.49□□□□□ -0.41
Thbs1P35441 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Thbs1P35441 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.49□□□□□ -0.41
Thbs1P35441 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.49□□□□□ -0.41
Thbs1P35441 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Thbs1P35441 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.49□□□□□ -0.41
Thbs1P35441 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.49□□□□□ -0.41
Thbs1P35441 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Gm5866-201ENSMUST00000177881 973 ntBASIC12.49□□□□□ -0.41
Thbs1P35441 Gm21854-201ENSMUST00000179901 471 ntBASIC12.49□□□□□ -0.41
Thbs1P35441 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Gm9522-201ENSMUST00000182394 926 ntBASIC12.49□□□□□ -0.41
Thbs1P35441 Gm27838-201ENSMUST00000184829 128 ntBASIC12.49□□□□□ -0.41
Thbs1P35441 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.49□□□□□ -0.41
Thbs1P35441 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.49□□□□□ -0.41
Thbs1P35441 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Thbs1P35441 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Thbs1P35441 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.49□□□□□ -0.41
Thbs1P35441 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.49□□□□□ -0.41
Thbs1P35441 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Thbs1P35441 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.48□□□□□ -0.41
Thbs1P35441 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.48□□□□□ -0.41
Thbs1P35441 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.48□□□□□ -0.41
Thbs1P35441 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.48□□□□□ -0.41
Thbs1P35441 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.48□□□□□ -0.41
Thbs1P35441 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.48□□□□□ -0.41
Thbs1P35441 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Thbs1P35441 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.48□□□□□ -0.41
Thbs1P35441 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.48□□□□□ -0.41
Thbs1P35441 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.48□□□□□ -0.41
Thbs1P35441 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.48□□□□□ -0.41
Thbs1P35441 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs1P35441 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms