Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.41□□□□□ -0.42
Sftpa1P35242 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.41□□□□□ -0.42
Sftpa1P35242 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sftpa1P35242 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sftpa1P35242 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sftpa1P35242 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sftpa1P35242 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sftpa1P35242 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sftpa1P35242 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Sftpa1P35242 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sftpa1P35242 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sftpa1P35242 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sftpa1P35242 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sftpa1P35242 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.4□□□□□ -0.42
Sftpa1P35242 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.4□□□□□ -0.42
Sftpa1P35242 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Gm43138-201ENSMUST00000199123 708 ntBASIC12.4□□□□□ -0.42
Sftpa1P35242 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.4□□□□□ -0.42
Sftpa1P35242 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.4□□□□□ -0.42
Sftpa1P35242 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.4□□□□□ -0.42
Sftpa1P35242 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
Sftpa1P35242 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Sftpa1P35242 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sftpa1P35242 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sftpa1P35242 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.4□□□□□ -0.43
Sftpa1P35242 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sftpa1P35242 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.39□□□□□ -0.43
Sftpa1P35242 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Gm21769-201ENSMUST00000211922 111 ntBASIC12.39□□□□□ -0.43
Sftpa1P35242 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms