Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Mmp3P28862 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.38□□□□□ -0.11
Mmp3P28862 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Mmp3P28862 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.38□□□□□ -0.11
Mmp3P28862 Gm7399-201ENSMUST00000032395 858 ntBASIC14.38□□□□□ -0.11
Mmp3P28862 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Mmp3P28862 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Mmp3P28862 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Mmp3P28862 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.38□□□□□ -0.11
Mmp3P28862 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.38□□□□□ -0.11
Mmp3P28862 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.37□□□□□ -0.11
Mmp3P28862 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Mmp3P28862 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Mmp3P28862 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.37□□□□□ -0.11
Mmp3P28862 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.37□□□□□ -0.11
Mmp3P28862 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.37□□□□□ -0.11
Mmp3P28862 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.37□□□□□ -0.11
Mmp3P28862 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.37□□□□□ -0.11
Mmp3P28862 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.37□□□□□ -0.11
Mmp3P28862 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.37□□□□□ -0.11
Mmp3P28862 Gm38002-201ENSMUST00000193255 180 ntBASIC14.37□□□□□ -0.11
Mmp3P28862 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Gm6013-201ENSMUST00000212264 699 ntBASIC14.37□□□□□ -0.11
Mmp3P28862 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.37□□□□□ -0.11
Mmp3P28862 Gm19309-201ENSMUST00000218295 205 ntBASIC14.37□□□□□ -0.11
Mmp3P28862 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.37□□□□□ -0.11
Mmp3P28862 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Mmp3P28862 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Mmp3P28862 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp3P28862 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Mmp3P28862 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mmp3P28862 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.36□□□□□ -0.11
Mmp3P28862 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.36□□□□□ -0.11
Mmp3P28862 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Gm37008-201ENSMUST00000195712 319 ntBASIC14.36□□□□□ -0.11
Mmp3P28862 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.36□□□□□ -0.11
Mmp3P28862 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.36□□□□□ -0.11
Mmp3P28862 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Mmp3P28862 Snora73a-201ENSMUST00000082453 205 ntBASIC14.36□□□□□ -0.11
Mmp3P28862 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms