Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NdnP25233 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NdnP25233 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
NdnP25233 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NdnP25233 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.82□□□□□ -0.68
NdnP25233 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NdnP25233 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NdnP25233 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NdnP25233 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.81□□□□□ -0.68
NdnP25233 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.81□□□□□ -0.68
NdnP25233 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
NdnP25233 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.81□□□□□ -0.68
NdnP25233 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
NdnP25233 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.81□□□□□ -0.68
NdnP25233 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
NdnP25233 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NdnP25233 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NdnP25233 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.81□□□□□ -0.68
NdnP25233 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NdnP25233 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NdnP25233 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
NdnP25233 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NdnP25233 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.8□□□□□ -0.68
NdnP25233 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
NdnP25233 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
NdnP25233 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
NdnP25233 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
NdnP25233 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NdnP25233 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Gm14042-201ENSMUST00000120139 833 ntBASIC10.8□□□□□ -0.68
NdnP25233 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.8□□□□□ -0.68
NdnP25233 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.8□□□□□ -0.68
NdnP25233 Gm37153-201ENSMUST00000193637 231 ntBASIC10.8□□□□□ -0.68
NdnP25233 Gm43347-201ENSMUST00000200226 580 ntBASIC10.8□□□□□ -0.68
NdnP25233 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Gm6296-201ENSMUST00000222599 943 ntBASIC10.8□□□□□ -0.68
NdnP25233 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.8□□□□□ -0.68
NdnP25233 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Rps4l-201ENSMUST00000071745 943 ntBASIC10.8□□□□□ -0.68
NdnP25233 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NdnP25233 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms