Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm15678-201ENSMUST00000117573 960 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm12403-201ENSMUST00000121384 959 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm11918-201ENSMUST00000121660 179 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm38223-201ENSMUST00000194484 695 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf1bP25119 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm15371-201ENSMUST00000117057 784 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm12490-201ENSMUST00000120255 560 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm12138-201ENSMUST00000122180 951 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm15429-201ENSMUST00000151268 798 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm27701-201ENSMUST00000184498 110 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm29608-201ENSMUST00000190444 463 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm45384-201ENSMUST00000210451 277 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf1bP25119 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Gm11424-201ENSMUST00000121929 829 ntBASIC12.47□□□□□ -0.41
Tnfrsf1bP25119 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms