Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
BdnfP21237 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.97□□□□□ -0.33
BdnfP21237 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BdnfP21237 Gm5312-201ENSMUST00000203728 547 ntBASIC12.97□□□□□ -0.33
BdnfP21237 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.97□□□□□ -0.33
BdnfP21237 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.97□□□□□ -0.33
BdnfP21237 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BdnfP21237 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
BdnfP21237 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
BdnfP21237 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
BdnfP21237 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BdnfP21237 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.97□□□□□ -0.33
BdnfP21237 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BdnfP21237 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BdnfP21237 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
BdnfP21237 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BdnfP21237 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.97□□□□□ -0.33
BdnfP21237 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.97□□□□□ -0.33
BdnfP21237 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
BdnfP21237 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BdnfP21237 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
BdnfP21237 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
BdnfP21237 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
BdnfP21237 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.96□□□□□ -0.33
BdnfP21237 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
BdnfP21237 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
BdnfP21237 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.96□□□□□ -0.33
BdnfP21237 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Gm6736-201ENSMUST00000166583 948 ntBASIC12.96□□□□□ -0.33
BdnfP21237 Gm28630-201ENSMUST00000187806 498 ntBASIC12.96□□□□□ -0.33
BdnfP21237 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.96□□□□□ -0.33
BdnfP21237 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BdnfP21237 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.96□□□□□ -0.34
BdnfP21237 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BdnfP21237 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
BdnfP21237 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
BdnfP21237 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.96□□□□□ -0.34
BdnfP21237 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BdnfP21237 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
BdnfP21237 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
BdnfP21237 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BdnfP21237 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
BdnfP21237 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BdnfP21237 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
BdnfP21237 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BdnfP21237 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
BdnfP21237 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BdnfP21237 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
BdnfP21237 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.95□□□□□ -0.34
BdnfP21237 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.95□□□□□ -0.34
BdnfP21237 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.95□□□□□ -0.34
BdnfP21237 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.95□□□□□ -0.34
BdnfP21237 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
BdnfP21237 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
BdnfP21237 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.95□□□□□ -0.34
BdnfP21237 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.95□□□□□ -0.34
BdnfP21237 Gm43575-201ENSMUST00000196420 516 ntBASIC12.95□□□□□ -0.34
BdnfP21237 Shd-206ENSMUST00000225145 998 ntBASIC12.95□□□□□ -0.34
BdnfP21237 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
BdnfP21237 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.95□□□□□ -0.34
BdnfP21237 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
BdnfP21237 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
BdnfP21237 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BdnfP21237 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.94□□□□□ -0.34
BdnfP21237 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms