Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hmga1P17095 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.71□□□□□ -0.22
Hmga1P17095 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hmga1P17095 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hmga1P17095 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hmga1P17095 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmga1P17095 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.7□□□□□ -0.22
Hmga1P17095 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.7□□□□□ -0.22
Hmga1P17095 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Mir686-201ENSMUST00000102174 109 ntBASIC13.7□□□□□ -0.22
Hmga1P17095 Gm11978-201ENSMUST00000122315 466 ntBASIC13.7□□□□□ -0.22
Hmga1P17095 Gm2231-201ENSMUST00000125661 612 ntBASIC13.7□□□□□ -0.22
Hmga1P17095 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmga1P17095 Gm19184-201ENSMUST00000196798 928 ntBASIC13.7□□□□□ -0.22
Hmga1P17095 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.7□□□□□ -0.22
Hmga1P17095 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmga1P17095 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hmga1P17095 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmga1P17095 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Hmga1P17095 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hmga1P17095 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hmga1P17095 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmga1P17095 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmga1P17095 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmga1P17095 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Hmga1P17095 Gm25261-201ENSMUST00000157416 134 ntBASIC13.69□□□□□ -0.22
Hmga1P17095 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hmga1P17095 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.69□□□□□ -0.22
Hmga1P17095 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.69□□□□□ -0.22
Hmga1P17095 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.69□□□□□ -0.22
Hmga1P17095 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmga1P17095 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hmga1P17095 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hmga1P17095 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hmga1P17095 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Hmga1P17095 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Hmga1P17095 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Gm16479-201ENSMUST00000121706 932 ntBASIC13.68□□□□□ -0.22
Hmga1P17095 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmga1P17095 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.68□□□□□ -0.22
Hmga1P17095 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms