Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zfp28P10078 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zfp28P10078 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Zfp28P10078 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Zfp28P10078 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Zfp28P10078 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zfp28P10078 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zfp28P10078 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Zfp28P10078 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Zfp28P10078 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Zfp28P10078 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.39□□□□□ -0.43
Zfp28P10078 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.39□□□□□ -0.43
Zfp28P10078 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Zfp28P10078 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Gm18206-201ENSMUST00000207027 926 ntBASIC12.39□□□□□ -0.43
Zfp28P10078 Gm18049-201ENSMUST00000208909 581 ntBASIC12.39□□□□□ -0.43
Zfp28P10078 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.39□□□□□ -0.43
Zfp28P10078 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.39□□□□□ -0.43
Zfp28P10078 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Zfp28P10078 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.39□□□□□ -0.43
Zfp28P10078 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zfp28P10078 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Zfp28P10078 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Zfp28P10078 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Zfp28P10078 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.38□□□□□ -0.43
Zfp28P10078 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Zfp28P10078 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.38□□□□□ -0.43
Zfp28P10078 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Zfp28P10078 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.38□□□□□ -0.43
Zfp28P10078 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.38□□□□□ -0.43
Zfp28P10078 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.38□□□□□ -0.43
Zfp28P10078 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.38□□□□□ -0.43
Zfp28P10078 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Zfp28P10078 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Zfp28P10078 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.38□□□□□ -0.43
Zfp28P10078 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Zfp28P10078 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Zfp28P10078 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.37□□□□□ -0.43
Zfp28P10078 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Zfp28P10078 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp28P10078 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms