Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Gm17330-201ENSMUST00000221047 165 ntBASIC11.33□□□□□ -0.6
Ly6c1P0CW02 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.33□□□□□ -0.6
Ly6c1P0CW02 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Ly6c1P0CW02 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Gm22709-201ENSMUST00000116893 111 ntBASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Gm42550-201ENSMUST00000201553 960 ntBASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Gm9520-201ENSMUST00000209460 1253 ntBASIC11.32□□□□□ -0.6
Ly6c1P0CW02 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ly6c1P0CW02 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gm22923-201ENSMUST00000174952 110 ntBASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gm2495-201ENSMUST00000191160 466 ntBASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.31□□□□□ -0.6
Ly6c1P0CW02 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gm38223-201ENSMUST00000194484 695 ntBASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms