Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC19.98■□□□□ 0.79
NclP09405 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NclP09405 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC19.97■□□□□ 0.79
NclP09405 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NclP09405 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NclP09405 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Gm29705-201ENSMUST00000212598 474 ntBASIC19.97■□□□□ 0.79
NclP09405 AC126253.1-201ENSMUST00000227974 824 ntBASIC19.97■□□□□ 0.79
NclP09405 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NclP09405 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NclP09405 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NclP09405 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC19.97■□□□□ 0.79
NclP09405 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC19.96■□□□□ 0.79
NclP09405 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC19.96■□□□□ 0.79
NclP09405 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
NclP09405 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NclP09405 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NclP09405 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NclP09405 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC19.96■□□□□ 0.79
NclP09405 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NclP09405 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC19.95■□□□□ 0.78
NclP09405 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC19.95■□□□□ 0.78
NclP09405 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC19.95■□□□□ 0.78
NclP09405 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NclP09405 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC19.95■□□□□ 0.78
NclP09405 Gm8062-201ENSMUST00000139696 444 ntBASIC19.95■□□□□ 0.78
NclP09405 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC19.95■□□□□ 0.78
NclP09405 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
NclP09405 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC19.95■□□□□ 0.78
NclP09405 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NclP09405 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NclP09405 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NclP09405 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NclP09405 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NclP09405 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NclP09405 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC19.94■□□□□ 0.78
NclP09405 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NclP09405 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NclP09405 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NclP09405 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NclP09405 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NclP09405 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC19.94■□□□□ 0.78
NclP09405 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NclP09405 Gm12203-201ENSMUST00000118235 598 ntBASIC19.94■□□□□ 0.78
NclP09405 Gm12209-201ENSMUST00000120089 596 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms